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ORIGINAL RESEARCH
Specific Genomic Fingerprints of Escherichia coli Strains with Repetitive Sequences and PCR as an Effective Tool For Monitoring Freshwater Environments
K. Baldy-Chudzik, M. Stosik
Department of Microbiology and Genetics, Institute of Biotechnology and Environmental Science,
University of Zielona Góra, ul. Monte Cassino 21B, 65-561 Zielona Góra, Poland
University of Zielona Góra, ul. Monte Cassino 21B, 65-561 Zielona Góra, Poland
Pol. J. Environ. Stud. 2005;14(5):551-557
KEYWORDS
ABSTRACT
The Rep-PCR fingerprinting method has been applied to identify genomic diversity of 252 E. coli strains derived in the area of a flowing-water basin. The received results show that applying UPGMA and Nearest Neighbour-Joining clustering methods to statistical analysis of rep-PCR fingerprints has made it possible to discriminate and group the strains, revealing a characteristic structure of E. coli population for particular stands of sample drawing. The proposed procedure of the analysis may be useful for routinely monitoring water quality.
CONFLICT OF INTEREST
The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
| eISSN: | 2083-5906 |
| ISSN: | 1230-1485 |
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