ORIGINAL RESEARCH
Quantitative Characteristics of Rice Grain Quality Traits and Genetic Parameters in Some Hybrid and Inbred Rice Genotypes
 
More details
Hide details
1
Agricultural Biotechnology Department, College of Agricultural and Food Science, King Faisal University, Al-Ahsa, 31982, Saudi Arabia
 
2
Rice Research and Training Center, Field Crop Research Institute, Agriculture Research Center, Giza, 33717, Egypt
 
3
Biological and Geological Sciences Department, Faculty of Education, Ain Shams University, Cairo, 11341, Egypt
 
4
Department of Arid Land Agriculture, College of Agricultural and Food Sciences, King Faisal University, Al-Ahsa, 31982, Saudi Arabia
 
 
Submission date: 2025-06-04
 
 
Final revision date: 2025-07-12
 
 
Acceptance date: 2025-07-23
 
 
Online publication date: 2025-10-13
 
 
Corresponding author
Adel A. Rezk   

Agricultural Biotechnology Department, College of Agricultural and Food Science, King Faisal University, Al-Ahsa, 31982, Saudi Arabia
 
 
Heba I. Mohamed   

Ain Shams University, Faculty of Education, Biological and Geological Sciences Department, Egypt
 
 
 
KEYWORDS
TOPICS
ABSTRACT
Rice grain quality characteristics are crucial in modern breeding programs. This study evaluated eight rice genotypes from Japonica, Indica, Indica-Japonica varieties, and hybrids. Additionally, the characteristics of paddy and milled grains, the correlation between these characteristics, and the degree of similarity between the genotypes under study were also included. ANOVA showed significant differences (p < 0.01) among all genotypes. Indica types had larger grain shapes compared to Japonica, which yielded higher total white rice and milling percentages but lower amylose percentages. The phenotypic coefficient of variation exceeded the genotypic coefficient for all traits. Heritability estimates ranged from 29.88% for breakage in white rice to 98.45% for elongation. Significant positive correlations were noted among traits like paddy grain shape and amylose percentage, while negative correlations existed between paddy grain width and several other traits. Principal component analysis identified eight grain traits with a total variance of 99.55% in grain quality. Cluster analysis grouped the studied genotypes into two groups: the first group included the two Indica hybrids (Hybrid 27P31 and Hybrid 28P67), while the second group included the remaining genotypes divided into two sub-groups. The Japonica types (Sakha101, Sakha108, Sakha104, and Giza177) were closely clustered in one sub-group, while the last sub-group included the Giza182 variety of Indica type and Egyptian hybrid1, which is an Indica-Japonica type.
CONFLICT OF INTEREST
The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
REFERENCES (54)
1.
WOLDE G., TOMAS S. Grain yield and protein content of upland rice (Oryza sativa L .) v arieties a s i nfluenced by combined application of primary secondary and micronutrients under Nitisols. African Journal of Plant Science, 14 (4), 183, 2020. https://doi.org/10.5897/AJPS20....
 
2.
AROUNA A., FATOGNON I.A., SAITO K., FUTAKUCHI K. Moving toward rice self-sufficiency in sub-Saharan Africa by 2030: Lessons learned from 10 years of the Coalition for African Rice Development. World Development Perspectives, 21, 100291, 2021. https://doi.org/10.1016/j.wdp.....
 
3.
AL-ZAHRANI H.S.M., ALMAGHRABI O.A., EL-MALKY M.M., METWALI E.M.R, RIHAN H.Z. Development of nutrient-rich and blast resistant rice cultivars through tissue culture and monogenic lines. International Journal of Agriculture and Biology, 20, 2508, 2018.
 
4.
LU Z., FANG Z., LIU W., LU D., WANG X., WANG S., XUE J., HE X. Grain quality characteristics analysis and application on breeding of Yuenongsimiao, a high‑yielding and disease‑resistant rice variety. Scientific Reports, 13 (2), 6335, 2023. https://doi.org/10.1038/s41598....
 
5.
SHE Y., GAO X., LU W.C., YANG Z., NIU B., ZHOU Y., HUANG X.Y., CHEN C. Ionomic and metabolomic analyses reveal association between nutritional value and aleurone layer thickness in rice. Food Chemistry, 471, 142829, 2025. https://doi.org/10.1016/j.food....
 
6.
PRAHARDINI P.E.R., FIDIYAWATI E., ANTARLINA S.S., SUDARYONO T. Characteristic of grain and rice quality from five superior varieties support food sustainability. OP Conference Series: Earth and Environmental Science, 1253, 012016, 2023. https://doi.org/10.1088/1755-1....
 
7.
REZK A.A., MOHAMED H.I., EL-BELTAGI H.S. Genetic variability and diversity analysis in Oryza sativa L. genotypes using quantitative traits and SSR markers. Saudi Journal of Biological Sciences, 31 (3), 103944, 2024. https://doi.org/10.1016/j.sjbs....
 
8.
REZK A., EL-MALKY M., MOHAMED H., EL-BELTAGI H. Genetic Variability and Phenotypic Correlations Study among Grain Quality Traits and Mineral Elements Concentrations in Colored and Non-Colored Rice. Phyton, 93 (7), 1733, 2024. https://doi.org/10.32604/phyto....
 
9.
LIU Q., CHEN S., ZHOU L., TAO Y., TIAN J., XING Z., WEI H., ZHANG H. Characteristics of Population Quality and Rice Quality of Semi-Waxy japonica Rice Varieties with Different Grain Yields. Agriculture, 12, 241, 2022. https://doi.org/10.3390/agricu....
 
10.
SULTANA S., FARUQUE M., ISLAM M.R. Rice grain quality parameters and determination tools: a review on the current developments and future prospects. International Journal of Food Properties, 25 (1), 1063, 2022. https://doi.org/10.1080/109429....
 
11.
OYUNGA M.A., GRANT F., OKEYO D.O., OUEDRAOGO H., LEVIN C., LOW J. Prevalence and predictors of vitamin A deficiency among infants in western Kenya using a cross-sectional analysis. African Journal of Food, Agriculture, Nutrition and Development, 16 (1), 10765, 2016. https://doi.org/10.18697/ajfan....
 
12.
ZHAO M., LIN Y., CHEN H. Improving nutritional quality of rice for human health. Theoretical and Applied Genetics, 133 (5), 1397, 2020. https://doi.org/10.1007/s00122....
 
13.
MEHMOOD S., UD DIN I., ULLAH I., MOHAMED H.I., BASIT A., KHAN M.N., HUSSAIN SHAH S.S., UR REHMAN A. Agro-morphological and genetic diversity studies in Rice (Oryza sativa L .) g ermplasm u sing microsatellite markers. Molecular Biology Reports, 48, 7179, 2021. https://doi.org/10.1007/s11033....
 
14.
DE STEUR H., STEIN A.J., DEMONT M. From Golden Rice to Golden Diets: How to turn its recent approval into practice. Global Food Security, 32, 100596, 2022. https://doi.org/10.1016/j.gfs.....
 
15.
ALAM M., TAN X., ZHANG H., LOU G., YANG H., ZHOU Y., HUSSAIN A., BHANTANA P., JIANG G., HE Y. QTL Mining and Validation of Grain Nutritional Quality Characters in Rice (Oryza sativa L .) U sing Two Introgression Line Populations. Agriculture, 13 (9), 1725, 2023. https://doi.org/10.3390/agricu....
 
16.
GONG D., ZHANG X., HE F., CHEN Y., LI R., YAO J., ZHANG M., ZHENG W., YU G. Genetic Improvements in Rice Grain Quality: A Review of Elite Genes and Their Applications in Molecular Breeding. Agronomy, 13, 1375, 2023. https://doi.org/10.3390/agrono....
 
17.
LIMENIE A.D., ALEHEGN M. Genetic Engineering for Cereal Crop Yield Improvement and Disease Resistant Breeding. The Scientific World Journal, 2025 (1), 6743917, 2025. https://doi.org/10.1155/tswj/6....
 
18.
ZHU D.W., ZHANG H.C., GUO B.W., XU K., DAI Q.G., WEI C.X., ZHOU G.S., HUO Z.Y. Physicochemical properties of indica-japonica hybrid rice starch from Chinese varieties. Food Hydrocolloids, 63, 356, 2017. https://doi.org/10.1016/j.food....
 
19.
BIAN J.L., REN G.L., HAN C., XU F.F., QIU S., TANG J.H., ZHANG H.C., WEI H.Y., GAO H. Comparative analysis on grain quality and yield of different panicle weight indica-japonica hybrid rice (Oryza sativa L.) cultivars. Journal of Integrative Agriculture, 19, 999, 2020. https://doi.org/10.1016/S2095-....
 
20.
SUTARDI C., APRIYANA Y., REJEKININGRUM P., ALIFIA A.D., RAMADHANI F., DARWIS V., SETYOWATI N., SETYONO D.E.D., GUNAWAN MALIK A., ABDULLAH S. The Transformation of Rice Crop Technology in Indonesia: Innovation and Sustainable Food Security. Agronomy, 13, 1, 2023. https://doi.org/10.3390/agrono....
 
21.
YANG Y., SHEN Z., XU C., GUO M., LI Y., ZHANG Y., ZHONG C., SUN S., YAN C. Genetic improvement of panicle-erectness japonica rice toward both yield and eating and cooking quality. Molecular Breeding, 40, 1, 2020. https://doi.org/10.1007/s11032....
 
22.
IRRI. Standard Evaluation System for Rice. International Rice Research Institute, Los Banos, Manila, Philippines. pp. 56, 2014.
 
23.
ADAIR C.R. The McGill miller method for determining the milled quality of small samples of rice. Rice Journal, 55 (2), 21, 1952.
 
24.
WILLIAMS V.R., WN W.T., TSAI H.R., BATES H.G. Varietal differences in amylose content of rice starch. Journal of Agricultural and Food Chemistry, 6, 47, 1958. https://doi.org/10.1021/jf6008....
 
25.
LITTLE R., HILDER G., DAWSON E. Differential effect of dilute alkali on 25 varieties of milled white rice. Cereal Chemistry, 35 (2), 111, 1958.
 
26.
PANG Y., ALI J., WANG X., FRANJE N.J., REVILLEZA J.E., XU J., LI Z., FU B. Relationship of Rice Grain Amylose, Gelatinization Temperature and Pasting Properties for Breeding Better Eating and Cooking Quality of Rice Varieties. PLOS ONE, 11 (12), e0168483, 2016. https://doi.org/10.1371/journa....
 
27.
JULIANO B.O. A simplified assay for milled rice amylose. Cereal Science Today, 16 (10), 334, 1971.
 
28.
LEONARD W.H., CLARK A.G. Field Plot Technique. Burgess Publishing Co., Minnesota, USA, 1993.
 
29.
DUDLEY J.W., MOLL R.H. Interpretation and use of estimates of heritability and genetic variances in plant breeding. Crop Science, 9 (257), 1969. https://doi.org/10.2135/cropsc....
 
30.
WRICKE G., WEBER W.E. Quantitative Genetics and Selection in Plant Breeding. Walter de Gruyter and Co., Berlin, Germany, 1986. https://doi.org/10.1515/978311....
 
31.
PRASAD S.R., PRAKASH R., SHARMA C.M, HAQUE M.F. Genotypic and phenotypic variability in quantitative characters in oat. Indian Journal of Agricultural Research, 51 (7), 480, 1981.
 
32.
ALLARD R.W. Principles of Plant Breeding. 2nd Edn., John Wiley and Sons, New York, USA., pp. 254, 1999.
 
33.
SNEATH P.H., SOKAL R.R. Numerical Taxonomy: The Principles and Practice of Numerical Classification. 1st Edition, W. H. Freeman, San Francisco, 1973.
 
34.
ROHLF F.J. NTSYS-PC manual Exeter Software, Setauket, New York, 2000.
 
35.
MUHAMMAD M., WAHAB A., WAHEED A., HAKEEM K.R., MOHAMED H.I., BASIT A., TOOR M.D., LIU Y.H., LI L., LI W.J. Navigating Climate Change: Exploring the Dynamics Between Plant-Soil Microbiomes and Their Impact on Plant Growth and Productivity. Global Change Biology, 31 (2), e70057, 2025. https://doi.org/10.1111/gcb.70....
 
36.
BASSUONY N.N., ZSEMBELI J., NOFAL R.S., ESSA W.M., FAZAA M. Genetic variability of some physiological traits, yield components and grain quality characters in rice entries. Agriculture, 68 (4), 143, 2022. https://doi.org/10.2478/agri-2....
 
37.
NOFAL R.S., NESSREEN N., BASSUONY N.N., GABALLAH M.M. Genetic Analysis to Improve Rice (Oryza sativa L) Grain Yield Attributes and Quality Traits. Journal of Plant Production, 15 (4), 197, 2024. https://doi.org/10.21608/jpp.2....
 
38.
SANDHU N., YADAV S., KUMAR SINGH V., KUMAR A. Effective Crop Management and Modern Breeding Strategies to Ensure Higher Crop Productivity under Direct Seeded Rice Cultivation System: A Review. Agronomy, 11 (7), 1264, 2021. https://doi.org/10.3390/agrono....
 
39.
ADHIKARI B.N., JOSHI B.P., SHRESTHA J., BHATTA N.R. Genetic variability, heritability, genetic advance and correlation among yield and yield components of rice (Oryza sativa L.). Journal of Agriculture and Natural Resources, 1 (1), 149, 2018. https://doi.org/10.3126/janr.v....
 
40.
ALI Z., NAEEM M., RAFIQ I., IKRAM R.M., AKRAM M.I., TAHA E.I., BEKHIT M.M., SIMSEK O., IZGU T., AHMED T., IQBAL J. Study of variability, combining ability, genetics and association of different yield related traits in rice (Oryza sativa L.) genotypes. Genetic Resources and Crop Evolution, 72 (3), 2925, 2025. https://doi.org/10.1007/s10722....
 
41.
BHUYAN S.S., BARIK D.P., DASH B., ROUT P., CHANDRAVANI M., BARAL S., MISHRA A., VERMA R.L., KATARA J.L., CHIDAMBARANATHAN P., DEVANNA B.N. Utilization of doubled haploid breeding approach in introgression of QTL/gene (s) for parental line improvement of hybrid rice. Journal of Applied Genetics, 2025. https://doi.org/10.1007/s13353....
 
42.
DEMEKE B., DEJENE T., ABEBE D. Genetic variability, heritability, and genetic advance of morphological, yield related and quality traits in upland rice (Oryza sativa L.) genotypes at pawe, northwestern Ethiopia. Cogent Food Agriculture, 9, 2157099, 2023. https://doi.org/10.1080/233119....
 
43.
BIAN J.L., REN G.L., XU F.F., ZHANG H.C., WEI H.Y. Comparison of grain yield and quality of different types of japonica rice cultivars in the northern Jiangsu plain, China. Journal of Integrative Agriculture, 20 (8), 2065, 2021. https://doi.org/10.1016/S2095-....
 
44.
FAYSAL A.S.M., ALI L., AZAM M.G., SARKER U., ERCISLI S., GOLOKHVAST K.S., MARC R.A. Genetic variability, character association, and path coefficient analysis in transplant Aman rice genotypes. Plants, 11 (21), 2952, 2022. https://doi.org/10.3390/plants....
 
45.
GABALLAH M.M., ATTIA K.A., GHONEIM A.M., KHAN N., EL-EZZ A.F., YANG B., XIAO L., IBRAHIM E.I., AL-DOSS A.A. Assessment of genetic parameters and gene action associated with heterosis for enhancing yield characters in novel hybrid rice parental lines. Plants, 11 (3), 1, 2022. https://doi.org/10.3390/plants....
 
46.
ESTHER F.D., ADJEI R.R., BOADU S.E., ODURO-OWUSU A.S., DUROWAA A. Genetic variability, heritability and path analyses of yield and yield related traits of newly developed rice (Oryza sativa L.) genotypes in lowland ecology in Ghana. Journal of Innovative Agriculture, 8 (1), 16, 2021. https://doi.org/10.37446/jinag....
 
47.
AL-DAEJ M.I., EL-MALKY M.M., SATTAR M.N., REZK A.A., NAQQASH M.N., AL-KHAYRI J.M. Rice (Oryza sativa L .) b reeding a mong H assawi l andrace a nd Egyptian genotypes for stem borer (Chilo agamemnon Bles.) resistance and related quantitative traits. Phyton, 91 (9), 1905, 2022. https://doi.org/10.32604/phyto....
 
48.
OKASA A.M., SJAHRI R., RIADI M., MAHENDRADATTA M., SATO T., TORIYAMA K., ISHII K., HAYASHI Y., ABE T. Correlation and path coefficient analysis of grain yield and its components in Toraja land-race aromatic rice mutants induced by heavy ion beam. Asian Journal of Plant Science, 20 (3), 406, 2021. https://doi.org/10.3923/ajps.2....
 
49.
SHI S., WANG E., L.I.C., ZHOU H., CAI M., CAO C., JIANG Y. Comprehensive evaluation of 17 qualities of 84 types of rice based on principal component analysis. Foods, 10 (11), 2883, 2021. https://doi.org/10.3390/foods1....
 
50.
MVUYEKURE S., SIBIYA J., DERERA J., NZUNGIZE J., NKIMA G. Application of principal components analysis for selection of parental materials in rice breeding. Journal of Genetics and Genomics, 3 (10), 2, 2018.
 
51.
EL-MALKY M.M., AL-DAEJ M.I. Assessment of inbreeding depression genetic variability and genetic diversity in rice (Oryza sativa L .) b ased o n a gromorphological traits. Fresenius Environmental Bulletin, 32 (4), 2067, 2023.
 
52.
EL-MALKY M.M. Heat tolerance and genetic diversity analyses of rice accessions using SSR markers. SABRAO Journal of Breeding and Genetics, 56 (2), 519, 2024. https://doi.org/10.54910/sabra....
 
53.
REZK A.A., MOHAMED M., MOHAMED H.I., ISMAIL A.H., AL-DOSSARY O. Impact of climate changes to adaptability of some rice germplasm (Oryza sativa L.) under high temperature through quantitative traits and simple sequence repeats (SSR) marker. Romanian Agricultural Research, 42, 483, 2025. https://doi.org/10.59665/rar42....
 
54.
EL-BELTAGI H.S., MOHAMED H.I., ALDAEJ M.I., AL-KHAYRI J.M., REZK A.A., AL-MSSALLEM M.Q., SATTAR M.N., RAMADAN K.M. Production and antioxidant activity of secondary metabolites in Hassawi rice (Oryza sativa L.) cell suspension under salicylic acid, yeast extract, and pectin elicitation. In Vitro Cellular Developmental Biology Plant, 58, 615, 2022. https://doi.org/10.1007/s11627....
 
eISSN:2083-5906
ISSN:1230-1485
Journals System - logo
Scroll to top