Soil organic matter (SOM) strongly influences microbial-driven nutrient cycling; however, its role
in shaping bacterial carbon metabolism in reclaimed mining soils remains underexplored.
We established a greenhouse pot experiment simulating SOM accumulation during restoration, with
five SOM levels (1.1%-3.5%), to assess impacts on bacterial diversity, abundance, and carbon metabolic
activity using molecular and biochemical assays. Results showed that SOM significantly increased
bacterial diversity and metabolic function, with peak diversity at 2.5% SOM. High SOM content was
associated with increased abundance of carbon metabolism-related genes and biofilm-forming bacteria.
Structural equation modeling revealed that SOM directly enhanced microbial diversity and indirectly
stimulated carbon metabolism by altering soil pH and nutrient status. These findings highlight SOM
as a central ecological driver of microbial carbon cycling and support SOM-enrichment strategies
for restoring soil microbial functions in degraded mining environments.
CONFLICT OF INTEREST
The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
REFERENCES(62)
1.
DA SILVA OLIVEIRA D.M., DE LIMA R.P., BARRETO M.S.C., VERBURG E.E.J., MAYRINK G.C.V. Soil organic matter and nutrient accumulation in areas under intensive management and swine manure application. Journal of Soils & Sediments, 17 (1), 1, 2017. https://doi.org/10.1007/s11368....
WANG W., BI S., LI F., DEGEN A.A., LI S., HUANG M., LUO B., ZHANG T., QI S., QI T., BAI Y., LIU P., SHANG Z. Soil organic matter composition affects ecosystem multifunctionality by mediating the composition of microbial communities in long-term restored meadows. Environmental Microbiome, 20 (1), 22, 2025. https://doi.org/10.1186/s40793....
BAI Z., LIU X., FAN X., ZHU C., YANG R. Chapter 18 - Ecological Reconstruction Research and Practice in the Large Open-Pit Coal Mine of the Loess Plateau, China. In Bio-Geotechnologies for Mine Site Rehabilitation, pp. 323, 2018. https://doi.org/10.1016/B978-0....
WU Z., WANG X., DAI Z., YU Q. Spatial distribution and its driving forces analysis of soil heavy metals in semiarid grassland surface coal mining areas. Polish Journal of Environmental Studies, 34 (1), 123, 2025. https://doi.org/10.15244/pjoes....
MUTIO J.M., KEBENEY S., NJOROGE R., CHURU H., NG'ETICH W., MUGAA D., ALKAMOI B., WAMALWA F. Effect of land rehabilitation measures on soil organic carbon fractions in semi-arid environment. Frontiers in Sustainable Food Systems, 7 (1), 1095865, 2023. https://doi.org/10.3389/fsufs.....
ZHOU L., LIU J., WANG Y., XU H., ZHANG S. Influence of mining on vegetation in semi-arid areas of western China: evidence of super-compensation in reclaimed sites. Journal of Arid Environments, 240, 1, 2024.
XU R., LI J., LI X., ZHANG J., SONG W. Effect of coal mining subsidence on soil enzyme activity in mining areas with high underground water levels. Water, 16 (12), 1704, 2024. https://doi.org/10.3390/w16121....
LIU Y., CHEN X.T., LIU J.X., LIU T.T., CHENG J.M., WEI G.H., LIN Y. Temporal and spatial succession and dynamics of soil fungal communities in restored grassland on the Loess Plateau in China. Land Degrad Dev, 30 (7), 1273, 2019. https://doi.org/10.1002/ldr.32....
NAVA-ARSOLA N.E., BELTRÁN-PAZ O., MARTÍNEZJARDINES G., CHÁVEZ-VERGARA B. Metabolic quotient and specific enzymatic activity responsivity to organic amendments in mining tailings. International Journal of Environmental Science and Technology, 20, 1234, 2023. https://doi.org/10.1007/s13762....
BLAUD A., DIOUF F., HERRMANN A.M., LERCH T.Z. Analysing the effect of soil organic matter on bacterial communities using T-RFLP fingerprinting: different methods, different stories? Biology and Fertility of Soils, 51 (8), 959, 2015. https://doi.org/10.1007/s00374....
LIU Y., ZHANG Y., WANG Y., LIU X., LIU X., ZHANG Y. Effects of ecological restoration on soil microbial community structure in the Daboshan mining area, China. Sustainability, 13 (21), 11684, 2021. https://doi.org/10.3390/su1321....
HU Y., LI C., YANG X., FENG J., WANG L., CHEN S., LI Y., YANG Y. Integrated biological control of tobacco bacterial wilt (Ralstonia solanacearum) and its effect on rhizosphere microbial community. Scientific Reports, 11 (1), 16360, 2021.
TAO F., LIU S., ZHANG W., ZHANG Y., WANG X., HUANG Y. Microbial carbon use efficiency promotes global soil carbon storage. Nature, 615 (7950), 147, 2023.
KALLENBACH C.M., WIKAN K., GRANDY A.S. Biomolecular budget of persistent, microbial-derived soil organic carbon. Science of the Total Environment, 884, 163638, 2024.
YAN M., LI T., LI X., LIU Y., ZHANG J. Microbial biomass and activity restrict soil function recovery of a post-mining land in eastern Loess Plateau. Catena, 199, 105107, 2021. https://doi.org/10.1016/j.cate....
UZAROWICZ Ł., WŁODARCZYK K., KUŹNIAR A., MARZEC-GRĄDZIEL A., GRĄDZIEL J., GAŁĄZKA A., WOLIŃSKA A. Soil microbial community profiling and bacterial metabolic activity of technosols as an effect of soil properties following land reclamation: a case study from the abandoned iron sulphide and uranium mine in Rudki. Agronomy, 10 (11), 1795, 2020. https://doi.org/10.3390/agrono....
LIN W., WANG Y., LI N., ZHAO N., XU S. Soil bacteria accelerate soil carbon loss by decomposing organic matter in grazing soils of alpine meadows on the Qinghai-Tibet Plateau. Microbial Ecology, 87 (2), 345, 2024. https://doi.org/10.1007/s00248....
GOUGOULIAS C., CLARK J.M. Soil microorganisms play dual roles in the carbon cycle of terrestrial ecosystems. Science of the Total Environment, 884, 163638, 2023.
BAI Y.C., LI B.X., XU C.Y., RAZA M., WANG Q., WANG Q.Z., FU Y.N., HU J.Y., IMOULAN A., HUSSAIN M., XU Y.J. Intercropping Walnut and Tea: Effects on Soil Nutrients, Enzyme Activity, and Microbial Communities. Front Microbiology, 13, 852342, 2022. https://doi.org/10.3389/fmicb.....
MUNEER M.A., HOU W., LI J., HUANG X., UR REHMAN KAYANI M., CAI Y., YANG W., WU L., JI B., ZHENG C. Soil pH: a key edaphic factor regulating distribution and functions of bacterial community along vertical soil profiles in red soil of pomelo orchard. BMC Microbiology, 22 (1), 38, 2022. https://doi.org/10.1186/s12866....
ZHAO Z., SHAHRUR I., BAI Z., FAN W., FENG L., LI H. Soils development in opencast coal mine spoils reclaimed for 1-13 years in the West-Northern Loess Plateau of China. European Journal of Soil Biology, 55, 40, 2013. https://doi.org/10.1016/j.ejso....
CAO Y., BAI Z., ZHANG G., ZHOU W., WANG J., YU Q., DU Z. Soil quality of surface reclaimed farmland in large open-cast mining area of Shanxi Province. Journal of Agriculture and Environment, 32, 2422, 2013.
CAO J. The succession of soil microbial under Pinus tabulaeformis plantations with different reclamation years, Antaibao Mine. Shanxi University, 2016.
XIN Z.H., LI J.J., ZHAO X.N., ZHOU X.M. Characteristics of soil organic carbon mineralization and enzyme activities in coal mining area after different reclamation times. Research of Environmental Sciences, 30 (10), 1580, 2017.
JIANG S., LIU H.H., ZHANG J., WANG G.L. Responses of soil nitrogen mineralization and nitrification to reclamation years and modes of coal mine. Chinese Journal of Eco-Agriculture, 27 (2), 286, 2019.
WANG H., LI M., ZHANG H. Variation and influencing factors of soil organic matter content in reclaimed areas of the Pingshuo open-pit coal mine. Acta Pedologica Sinica, 60 (3), 423, 2023.
GRYTA A., FRĄC M., OSZUST K. The Application of the Biolog EcoPlate Approach in Ecotoxicological Evaluation of Dairy Sewage Sludge. Applied Biochemistry and Biotechnology, 174, 1434, 2014. https://doi.org/10.1007/s12010....
TONYA W., JAKE L., JEREMY M., BEN H., JOSHUA L., DIMITRI S., JOHN S., GREG C., RAN B., ROB K. BugBase predict organism level microbiome phenotypes. bioRxiv, 2017.
IJOMA G.N., NKUNA R., MUTUNGWAZI A., RASHAMA C., MATAMBO T.S. Applying PICRUSt and 16S rRNA functional characterisation to predicting codigestion strategies of various animal manures for biogas production. Scientific Reports, 11, 19913, 2021. https://doi.org/10.1038/s41598....
JIAO S., CHEN W., WANG J., DU N., LI Q., WEI G. Soil microbiomes with distinct assemblies through vertical soil profiles drive the cycling of multiple nutrients in reforested ecosystems. Microbiome, 6 (1), 146, 2018. https://doi.org/10.1186/s40168....
QAZI M.A., KHAN N.I. Effect of site-specific integrated nutrient management on soil fertility under cotton-wheat cropping system of Punjab, Pakistan. Polish Journal of Environmental Studies, 30 (1), 305, 2021. https://doi.org/10.15244/pjoes....
LIN Y.X., YE G.P., KUZYAKOV Y., LIU D.Y., FAN J.B., DING W.X. Long-term manure application increases soil organic matter and aggregation, and alters microbial community structure and keystone taxa. Soil Biology & Biochemistry, 134, 187, 2019. https://doi.org/10.1016/j.soil....
HUANG Y.L., DAI Z.M., LIN J.H., LI D.M., YE H.C., DAHLGREN R.A., XU J.M. Labile carbon facilitated phosphorus solubilization as regulated by bacterial and fungal communities in Zea mays. Soil Biology & Biochemistry, 163, 108465, 2021. https://doi.org/10.1016/j.soil....
ZHANG Z., LIU H., LIU X., CHEN Y., LU Y., SHEN M., DANG K., ZHANG Y., DU Y., LI Q. Organic fertilizer enhances rice growth in severe saline-alkali soil by increasing soil bacterial diversity. Soil Use and Management, 38 (1), 964, 2021. https://doi.org/10.1111/sum.12....
SUBERKROPP K. Microorganisms and organic matter decompositions. River Ecology and Management: Lessons from the Pacific Coastal Ecoregion (eds. R.J. Naiman and R.E. Bilby), Springer-Verlag, New York, pp. 120–143, 1998.
JÍLKOVÁ V., JANDOVÁ K., CAJTHAML T., DEVETTER M., VACÍOVÁ A. Organic matter decomposition and carbon content in soil fractions as affected by a gradient of labile carbon input to a temperate forest soil. Biology and Fertility of Soils, 56, 411, 2020. https://doi.org/10.1007/s00374....
LI Y., GE Y., WANG J., SHEN C., LIU Y. Functional redundancy and specific taxa modulate the contribution of prokaryotic diversity and composition to multifunctionality. Molecular Ecology, 00, 1, 2021. https://doi.org/10.1111/mec.15....
MIHELIČ R., PEČNIK J., MATJAZ G., MARINA P. Impact of sustainable land management practices on soil properties: example of organic and integrated agricultural management. Land, 10 (1), 8, 2021. https://doi.org/10.3390/land10....
BÖDEKER I.T., NYGREN C.M., TAYLOR A.F., OLSON A., LINDAHL B.D. Class II peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi. ISME J, 3 (12), 1387, 2009. https://doi.org/10.1038/ismej.....
BAYER E.A., LAMED R., HIMMEL M.E. The potential of cellulases and cellulosomes for cellulosic waste management. Current Opinion in Biotechnology, 33, 130, 2021.
WANG Q., WAN J., LI H., LIU B., TAO K., JIN H., HOU T. Effects of disturbances by plateau pikas on soil microbial communities in an alpine ecosystem of the southeast Qinghai-Tibetan plateau, China. European Journal of Soil Biology, 113, 103442, 2022. https://doi.org/10.1016/j.ejso....
BLANCHET M., PRINGAULT O., BOUVY M., CATALA P., ORIOL L., CAPARROS J., ORTEGA-RETUERTA E., INTERTAGLIA L., WEST N., AGIS M., GOT P., JOUX F. Changes in bacterial community metabolism and composition during the degradation of dissolved organic matter from the jellyfish Aurelia aurita in a Mediterranean coastal lagoon. Environmental Science and Pollution Research, 22, 13638, 2015. https://doi.org/10.1007/s11356....
YANG Y., CHEN Q., ZHOU Y., YU W., SHI Z. Soil bacterial community composition and function play roles in soil carbon balance in alpine timberline ecosystems. Journal of Soils & Sediments, 24, 323, 2024. https://doi.org/10.1007/s11368....
YANG B., FENG W., ZHOU W., HE K., YANG Z. Association between soil physicochemical properties and bacterial community structure in diverse forest ecosystems. Microorganisms, 12, 728, 2024. https://doi.org/10.3390/microo....
GRAHAM M.H., HAYNES R.J. Organic matter status and the size, activity and metabolic diversity of the soil microbial community in the row and inter-row of sugarcane under burning and trash retention. Soil Biology & Biochemistry, 38 (1), 21, 2006. https://doi.org/10.1016/j.soil....
HE X., LI Q., FU L., YANG T., LI Y., CHEN S. Effects of an EPS biosynthesis gene cluster on biofilm formation in Paenibacillus polymyxa. Microorganisms, 9, 289, 2021. https://doi.org/10.3390/microo....
EBRAHIMI A., OR D. Microbial community dynamics and assembly regulated by interactions and selforganization in biofilms. Environmental Microbiology, 22 (5), 1770, 2020.
DERVAUX J., MAGNIEZ J.C., LIBCHABER A. On growth and form of Bacillus subtilis biofilms. Interface Focus, 4, 20130051, 2014. https://doi.org/10.1098/rsfs.2....
DOUTERELO I., SHARPE R., BOXALL J. Influence of hydraulic regimes on bacterial community structure and composition in an experimental drinking water distribution system. Water Research, 47, 503, 2013. https://doi.org/10.1016/j.watr....
WANG P., ZHANG X., HAO M., et al. Effects of vegetation restoration on soil bacterial communities, enzyme activities, and nutrients of reconstructed soil in a mining area on the Loess Plateau, China. Sustainability, 11 (8), 2295, 2019. https://doi.org/10.3390/su1108....
YUAN Y., ZHAO Z., NIU S. The reclaimed coal mine ecosystem diverges from the surrounding ecosystem and reaches a new self-sustaining state after 20-23 years of succession in the Loess Plateau area, China. Science of the Total Environment, 727, 138739, 2020. https://doi.org/10.1016/j.scit....
SUN J., YANG L., WEI J., QUAN J., YANG X. The responses of soil bacterial communities and enzyme activities to the edaphic properties of coal mining areas in Central China. PLoS One, 15 (4), e0231198, 2020. https://doi.org/10.1371/journa....
ZHANG X., LIU C., DONG S., et al. Soil microbial and enzyme responses to reclamation across a distance gradient from an opencast coal mine in a semi-humid region of northeast China. Catena, 218, 106582, 2023.
We process personal data collected when visiting the website. The function of obtaining information about users and their behavior is carried out by voluntarily entered information in forms and saving cookies in end devices. Data, including cookies, are used to provide services, improve the user experience and to analyze the traffic in accordance with the Privacy policy. Data are also collected and processed by Google Analytics tool (more).
You can change cookies settings in your browser. Restricted use of cookies in the browser configuration may affect some functionalities of the website.